List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
IRog1 higher taxonomic levels 16S phylum Acidobacteria group a
IRog2 higher taxonomic levels 16S phylum Acidobacteria group a
LEG226 bacteria of medical or hygienical relevance 16S Legionellaceae
LEG705 bacteria of medical or hygienical relevance 16S Legionella
LEGPNE1 bacteria of medical or hygienical relevance 16S Legionella pneumophila
LGC354A higher taxonomic levels 16S Firmicutes (Gram-positive bacteria with low G+C content)
LGC354B higher taxonomic levels 16S Firmicutes (Gram-positive bacteria with low G+C content)
LGC354C higher taxonomic levels 16S Firmicutes (Gram-positive bacteria with low G+C content)
LM3 S-G-Bif-1412-a-A-21 animal and human associated microbiota, intestinal microbiota 16S Bifidobacterium genus
MB1 methanogenic archaea 16S Methanosarcina frisius, Methanosarcina sp., Methanosarcina acidovorans, Methanosarcina thermophila, Methanosarcina barkeri
MB1174 methanogenic archaea 16S Methanobacterium spp., Methanobrevibacter spp., Methanosphaera spp.
MB3 methanogenic archaea 16S Methanosarcina frisius, Methanosarcina acidovorans, Methanosarcina thermophila, Methanosarcina barkeri
MB310 methanogenic archaea 16S Methanobacterium spp., Methanobrevibacter spp., Methanosphaera spp.
MB4 methanogenic archaea 16S Methanosarcina thermophila, Methanosarcina barkeri
MC1109 methanogenic archaea 16S Methanococcus spp.
Mcd77 S-G-gMcd-0077-a-A-21 methylotrophic bacteria 16S Methylocaldum spp.
Mcell-1026 methylotrophic bacteria 16S Methylocella palustris
Mcell-181(AcidM-181) methylotrophic bacteria 16S Methylocella palustris+Methylocapsa acidiphila
MG1200 methanogenic archaea 16S Methanomicrobium spp., Methanogenium spp., Methanoculleus spp., Methanospirillum spp., Methanocorpusculum spp., Methanoplanus spp.
MG3 methanogenic archaea, iron- and manganese-reducing bacteria 16S all methanogens, Halobacterium spp., Pyrococcus spp., Sulfolobus spp., Homo sapiens, Thermofilum spp., Pyrobaculum spp.
MICR#1 - 16S Microcystis spp.
MICR#2 - 16S Microcystis aeruginosa NIVA-CYA 143, 57, 228/1, 43, 123/1, 31, 166, M. cf. ichthyoblabe, NIVA-CYA 279, M. cf. wesenbergii NIVA-CYA 172/5, M. viridis NIVA-CYA 122/2
MICR#3 - 16S Microcystis spp.
Mlb482 S-G-gMlb-0482-a-A-23 methylotrophic bacteria 16S Methylobacter spp.
Mlb662 S-G-gMlb-0662-a-A-22 methylotrophic bacteria 16S Methylobacter spp.