List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
Rbla1372 - 16S Rhodobacter blasticus
Rbmr151 - 16S Rhodobium marinum, Rhodopseudomonas julia
Rvsl139 - 16S Rhodovulum sulfidophilum
Cboid198 S-S-C.boid-0198-a-A-18 - 18S Candida boidinii
KIN516 - 18S Kinetoplastida
CFX197 S-*-Bact-0197-a-A-18 - 16S Eikelboom type 0092 Chloroflexi
CFX223 S-*-Bact-0223-a-A-18 - 16S Eikelboom type 0092 Chloroflexi
CFX67a S-*-Bact-0067-a-A-18 - 16S Eikelboom type 0914 Chloroflexi
CFX67b S-*-Bact-0067-b-A-18 - 16S Eikelboom type 0914 Chloroflexi
NITROSO4E - 16S b-Proteobacterial ammonia oxidizers (also Nodularia sp.)
NSM1B - 16S Nitrosomonas europaea, Nitrosomonas eutropha, Nitrosococcus mobilis
NBAC2 - 16S Nitrobacter winogradskyi, Nitrobacter hamburgensis, Nitrobacter agilis (also Afipia clevelandensis, Afipia felis, Rhodopseudomonas palustris strain, Bradyrhizobium japonicume)
ERY174 - 16S Some Novosphingomonas, Erythrobacter and Porphyrobacter
PARA739 - 16S Order Rhodobacterales
RHIZ1244 - 16S Order Rhizobiales
Lepto175 - 16S Leptothrix ochracea
Proti_445 S-G-Proti-0445-a-A-19 - 16S primary symbiont of Euplotes samples POH1, EM, FL(12)-VI
Proti_467 S-G-Proti-0467-a-A-18 - 16S primary symbiont of Euplotes samples POH1, EM, FL(12)-VI
Dbact653 S-F-Dsb-0653-a-A-18 - 16S Desulfococcus/Desulfosarcina/Desulfonema
DSU655 - 16S Genus Desulfurella
ATAM01 S-S-A.tam-0775(A. Tamarense)-a-A-18 - 18S Alexandrium tamarense species complex
ATNA02 L-St-At.NA-373(A. tamarense)-a-A-18 - 28S Alexandrium tamarense /North American clade/Orkney strains
ATWE03 - 28S Alexandrium tamarense /Western European clade
ATME04 - 28S Alexandrium tamarense / Mediterranean clade
DINO01 S-C-DINO-1404(A. tamarense)-a-A-20 - 18S Dinoflagellates / Dinophyceae