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Details of the microarray

Array name	Description	Technique	Reference
SRP-PhyloChip	Low-density oligonucleotide microarray (microchip) for identification of all recognized lineages of sulfate-reducing prokaryotes (SRPs). The microarray contains 142 different 18-mer oligonucleotide probes of parallel and hierarchical specificity (multiple probe concept) targeting the 16S rRNA (gene) of all bacterial and archeal SRPs.	Oligonucleotide probes with a 15 dTTP spacer-element and amino-modification at the 5'-terminal end were spotted on aldehyde-group coated glass slides using a contact-spotting device.	Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment. Loy A, Lehner A, Lee N, Adamczyk J, Meier H, Ernst J, Schleifer KH, Wagner M. Applied and environmental microbiology. 2002. Pubmed: 12324358

The following probes are part of the array:

804(Dsb804) (pB-9), D-acet1027r (DFACE1028) (pB-59), DCC209 (pB-63), DCC868 (pB-64), DSBAC355 (pB-76), DSC193 (pB-78), DSD131 (DSVAE131) (pB-79), DSR651 (pB-82), DSS658 (pB-84), DSV1292 (pB-86), EUB338 (Bact338) (bacterial) (pB-159), EUB338 II (SBACT P 338) (pB-160), EUB338 III (SBACT V 338) (pB-161), LGC354A (pB-195), LGC354B (pB-196), LGC354C (pB-197), SRB385 (SRB) (pB-300), SRB385Db (pB-301), SYN835 (pB-307), UNIV1389a (pB-428), UNIV1389b (pB-429), UNIV1389c (pB-430), DSM194 (pB-506), DSM213 (pB-507), DSHRE830 (pB-508), DSHRE995 (pB-509), DSHRE1243 (pB-510), DFMI227a (pB-511), DFMI227b (pB-512), DFMI210 (pB-513), DFMI229 (pB-514), DFMIa641 (pB-515), DFMIb726 (pB-516), DFMIc841 (pB-517), DFMIc1012 (pB-518), DFMIc1119 (pB-519), DFMIc1138 (pB-520), DFMId436 (pB-521), DFMId625 (pB-522), DFMId996 (pB-523), DFMId1117 (pB-524), DFACE199 (pB-525), ARCH917 (pB-431), DELTA495a (pB-432), DELTA495b (pB-433), DELTA495c (pB-434), NTSPA714 (pB-435), DSB706 (pB-436), DSB230 (pB-437), DSTAL131 (pB-438), DSTAL213 (pB-439), DSTAL645 (pB-440), DSTAL732 (pB-441), DSTAL835 (pB-442), DSRHP185 (pB-443), DSBB228 (pB-444), DSBB660 (pB-445), DSB986 (pB-446), DSB1030 (pB-447), DSB1240 (pB-448), DSB623a (pB-449), DSB623b (pB-450), DSBLA623 (pB-451), DSBACL143 (pB-452), DSBACL225 (pB-453), DSBACL317 (pB-454), DSBACL1268 (pB-455), DSBACL1434 (pB-456), DSB674 (pB-457), DSB220 (pB-458), DSBM1239 (pB-459), DSFRG211 (pB-460), DSFRG445 (pB-461), DSFRG1030 (pB-462), DSSDBM194 (pB-463), DSSDBM217 (pB-464), DSSDBM998 (pB-465), DSSDBM1286 (pB-466), DSBMIN218 (pB-467), DSNISH179 (pB-468), DSNISH442 (pB-469), DSNISH1001 (pB-470), DSN658 (pB-471), DSBOSA445 (pB-472), DSMON95 (pB-473), DSMON1421 (pB-474), SYBAC986 (pB-475), DSACI175 (pB-476), DSACI207 (pB-477), TDRNO448 (pB-478), TDRNO1030 (pB-479), TDRNO1443 (pB-480), DSV686 (pB-481), DSV698 (pB-482), DVDAPC872 (pB-483), DVHO130 (pB-484), DVHO733 (pB-485), DVHO831 (pB-486), DVHO1424 (pB-487), DVAA1111 (pB-488), DVGL199 (pB-489), DVGL445 (pB-490), DVGL1151 (pB-491), DVGL1421 (pB-492), DSV820 (pB-493), DVSZ849 (pB-494), DVIG448 (pB-495), DVIG468 (pB-496), DSV651 (pB-497), DVFABS153 (pB-498), DVFABS653 (pB-499), DVFABS1351 (pB-500), DVLVT139 (pB-501), DVLVT175 (pB-502), DVLT131 (pB-503), DVLT986 (pB-504), DVLT1027 (pB-505), DFACE438 (pB-526), DFACE995 (pB-527), DFACE1436 (pB-528), DFMIf126 (pB-529), DFMII1107 (pB-530), DFMII1281 (pB-531), TDSV601 (pB-532), Tdsulfo848 (TDSV849) (pB-533), TDSV1326 (pB-534), TDSBM1282 (pB-535), TDSBM353 (pB-536), TDSBM652 (pB-537), ARGLO37 (pB-538), ARGLO276 (pB-539), ARGLO576 (pB-540), ARGLO972 (pB-541), SYBAC697 (pB-793), SYBAC587a (pB-794), SYBAC587b (pB-795), DSMON999 (pB-796), DSMON1283 (pB-797), DSMON447 (pB-798), DSMON468a (pB-799), DSMON446 (pB-800), DSMON468b (pB-801)