Tested for in situ hybridization.
| Accession no. | pB-943 |
| Full name (Alm et al.) | S-*-Ato-0291-a-A-17 |
| Categories |
animal and human associated microbiota intestinal microbiota |
| Specificity | Atopobium cluster |
| Taxonomy | Atopobium; Atopobiaceae; Coriobacteriales; Coriobacteriia; Actinomycetota; Bacillati; Bacteria; cellular organisms |
| Sequence | 5'-GGT CGG TCT CTC AAC CC-3' |
| Length [nt] | 17 |
| G+C content [%] | 65 |
| Target rRNA | 16S |
| Position | 291-307 |
| Formamide | - |
| Check specificity/coverage |
SILVA TestProbe |
| References |
Development of 16S rRNA-based probes for the Coriobacterium group and the Atopobium cluster and their application for enumeration of Coriobacteriaceae in human feces from volunteers of different age groups. Harmsen HJ, Wildeboer-Veloo AC, Grijpstra J, Knol J, Degener JE, Welling GW. Applied and environmental microbiology. 2000. Pubmed: 11010909 |
| Remarks | Atopobium cluster includes the Coriobacterium group. No formamide used hybridization temperature 50° C. |