Probe details

Erec207

Accession no. pB-777
Full name (Alm et al.) S-S-Erec-0207-a-A-18
Categories animal and human associated microbiota
intestinal microbiota
Specificity Eubacterium rectale sp. strain A1-86
Taxonomy Agathobacter rectalis; Agathobacter; Lachnospiraceae; Lachnospirales; Clostridia; Bacillota; Bacillati; Bacteria; cellular organisms
Sequence 5'-GGT GGT GTA CAA GAC CCG-3'
Length [nt] 18
G+C content [%] 61
Target rRNA 16S
Position 207-229
Formamide -
Check specificity/coverage SILVA TestProbe
References Oligonucleotide probes that detect quantitatively significant groups of butyrate-producing bacteria in human feces. Hold GL, Schwiertz A, Aminov RI, Blaut M, Flint HJ. Applied and environmental microbiology. 2003. Pubmed: 12839823
Remarks No formamide used hybridization temperature: 52° C.