List of probes and primers

194 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
ARBA (23-mer) — bacteria of medical or hygienical relevance 16S Arcobacter spp. ✘ ✘
ARBA (27-mer) — bacteria of medical or hygienical relevance 16S Arcobacter spp. ✘ ✘
ARBU (24-mer) — bacteria of medical or hygienical relevance 16S Arcobacter butzleri ✘ ✘
Hp16S-1 — bacteria of medical or hygienical relevance 16S Helicobacter pylori ✔ ✘
ALBO577 — bacteria of medical or hygienical relevance, bacteria of relevance in wastewater treatment 16S Alcaligenes, Bordetella and close relatives ✔ ✘
EBAC1790 S-*-EBAC-1790-a-A-18 bacteria of medical or hygienical relevance 23S Enterobacteriaceae ✔ ✘
Hpy16S — bacteria of medical or hygienical relevance 16S Helicobacter pylori ✔ ✘
Bfra602 S-*-Bfra-0602-a-A-19 bacteria of medical or hygienical relevance 16S Bacteroides fragilis group ✔ ✘
Bdis656 S-*-Bdis-0656-a-A-18 bacteria of medical or hygienical relevance 16S Bacteroides distasonis ✔ ✘
Chis150 S-*-Chis-0150-a-A-23 bacteria of medical or hygienical relevance 16S most of the Clostridium histolyticum group (Clostridium cluster I and II) ✔ ✘
Lis-637 — bacteria of medical or hygienical relevance 16S Listeria spp., except L. grayi ✔ ✘
Bmy843 S-*-Bmy-0843-a-A-18 bacteria of medical or hygienical relevance 16S Bacillus ✔ ✘
Ver620 S-*-Ver-0620-a-A-18 bacteria of medical or hygienical relevance 16S Verrucomicrobium ✔ ✘
MIB661 S-S-Bacm-0661-a-A-18 bacteria of medical or hygienical relevance 16S mouse intestinal bacteria ✔ ✘
MIB724 S-S-Bacm-0724-a-A-18 bacteria of medical or hygienical relevance 16S mouse intestinal bacteria ✔ ✘
FNEC — bacteria of medical or hygienical relevance 16S Fusobacterium necrophorum ✘ ✘
B6 — bacteria of medical or hygienical relevance 16S subgroup of Brucella spp. ✘ ✘
B9 — bacteria of medical or hygienical relevance 16S subgroup of Brucella spp. ✘ ✘
B13 — bacteria of medical or hygienical relevance 16S subgroup of Brucella spp. ✘ ✘
Staph747 S-G-Staph-0747-a-A-19 bacteria of medical or hygienical relevance 16S Staphylococcus spp. ✘ ✘
Eca58 — bacteria of medical or hygienical relevance 23S Enterococcus casseliflavus ✘ ✘
Edr58 — bacteria of medical or hygienical relevance 23S Enterococcus durans ✘ ✘
Ehr58 — bacteria of medical or hygienical relevance 23S Enterococcus hirae ✘ ✘
Efm09 — bacteria of medical or hygienical relevance 23S Enterococcus faecium ✘ ✘
Ema58i — bacteria of medical or hygienical relevance 23S Enterococcus malodoratus ✘ ✘